Protein Information

Protein ZmC3H7
ZmC3H7 is a protein in the C3H family.
Information
TF Name:	ZmC3H7
Species:	Maize
TF Family:	C3H
Gene Name(Synonym):	C3H7
Uniprot ID:	K7V5R1
Subgenome:	2

Overview of domains present in v5 transcripts
	PF00642
Zm00001eb354920_T001

Gene ID	Type	Sequence	FIMO	Position
Zm00001d010956	DAPseq	sequence	fimo	position
Zm00001d010956	DAPseq	sequence	fimo	position
Zm00001d010956	ChIPseq	sequence	fimo	position
Zm00001d010956	PChIPseq	sequence	fimo	position

Zm00001eb354920_T001 from maize genome v5

Amino Acid Sequence
Copy to clipboard
Color Coding: None Secondary Structure Domain

MCSGPRKPSTPPLPAETATAKNSSVMATALLLELAAADDVVAFRRAAEDDKAPALDAVGHWYGPSAAGAGAAAGRPRLEA
RTPTMVAALYGSTAVLAYVLSSAPAEAARASPTDGATPLHLAAAGGAPAAVAAAHILLAAGASADARAFSGLRAGDLLLP
RAAAAAAADADRALRVLLKSPAASPSSSPKKSASPPPAPEARKEYPPDLTLPDLKSGLFSTDEFRMYSFKVKPCSRAYSH
DWTECPFVHPGENARRRDPRRYSYSCVPCPEFRKGGACRKGDGCEYAHGVFECWLHPAQYRTRLCKDEVGCARRICFFAH
KREELRAVNPSAVSVGMQMQPTVSPPPPSGLGDMLSPAAWPSSPASRLNKAALGGGRDLDLDQYQHMLFDTVSSPRANWG
SAGGIGSPLPPARAVPDYADLLGSVDAASMLSQLHALSLKQAGGDMPAYGSMVADTQPHMATTSPMVGLGSSTAFGLDHS
MAKAILSSRASAFAKRSQSFVDRGGRAPAARSLMSQQAAAAGAPPVLSDWASPDGRLDWGVQGDELHKFRKSASFAFRAR
SPPPPAEPDVSWVSSLVKDGHAGDIFAQWPELEQMVA

Secondary Structure Color Code
BEND	region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P	left-handed polyproline helix
HELX_RH_3T_P	right-handed 3-10 helix
HELX_RH_AL_P	right-handed alpha helix
HELX_RH_PI_P	right-handed pi helix
STRN	beta strand
TURN_TY1_P	type I turn
UNDETERMINED	no data available

Domains Present
PF00642
PF00642
PF00642
Hover here to show all domains

Nucleotide Sequence
Copy to clipboard

Expand

CAGAGGGCACTACCAGGCGATCCGG...

CAGAGGGCACTACCAGGCGATCCGGCGACCTGTCGCAGGCCGCCACTACTGTTCACCTTGCGGAGCCGAACCCAAGGTGCCAAGCACCGCTAAGCGGTTCATTATAGTGTTTGGTGACAAAAAGGCACCAACACATCTTAATAAAGATACCAAGAGCAAAAGAAGAATCATTCACCCGTGTCTGCACACGGCACGCACGGGGAAGTTAGCAAGCAACTAGCTGTACATTTAAAAATAAAGAACAAAGACCGTGAAGGAAAAACGAAAGGAGCACGAATGAGCGGCTTGTGCGCGTCCTCCTCTTTAGACCACGCGAGCTCGGCGACGCCAGAAAATGTCCCTCCTTTTCCCCTTCTTTCCGCAAACAAACAAACGTTTGCGAAAGCCATACACAGGGACACGAGAGAGACCGAGGCAAGAGAGAAGAGACCATCCAGGCTGCTTCGTGTCCGTCTCCGTCTCCTTCCCTATGACCCTATCACACTCTCATCTCACCCCACCCCGCGCCCTGGCTTTTCTATCCTCCATTATTCTCCCCTCCCCACGTACCCCACCTCCCTCTACATATACCCCACTCTCATCTCATCTCACCTCCTCCTCAACGCACCACCCACCCACCCACGCCACCGTGTGGTCCGAGTCCGACCCTGTGACTGTGAGTACTACTACCCCAGCATGTGCTCAGGACCTCGCAAGCCGTCCACCCCTCCTCTCCCGGCGGAGACGGCGACGGCCAAGAACTCCTCGGTGATGGCGACGGCACTCCTGCTCGAGCTGGCGGCGGCGGACGACGTGGTGGCGTTCAGGCGCGCCGCGGAGGATGACAAAGCCCCGGCCTTGGACGCCGTGGGCCACTGGTACGGCCCGTCCGCCGCGGGCGCGGGCGCGGCCGCCGGCCGCCCCCGCCTCGAGGCGCGCACGCCGACCATGGTCGCCGCGCTCTACGGCAGCACGGCGGTGCTGGCGTACGTGCTGTCCTCCGCGCCGGCAGAGGCCGCGCGCGCGTCGCCCACGGACGGCGCCACGCCGCTCCACCTCGCTGCGGCCGGCGGCGCCCCGGCCGCCGTCGCGGCCGCGCACATCCTCCTCGCCGCGGGCGCGTCCGCGGACGCGCGCGCCTTCTCGGGCCTCCGCGCCGGGGACCTCCTCCTCCCGCGCGCCGCCGCCGCCGCCGCCGCCGACGCGGACCGGGCGCTCCGCGTGCTCCTCAAGTCCCCCGCGGCGTCACCGTCGTCCTCGCCCAAGAAGTCCGCCTCGCCGCCGCCGGCCCCGGAGGCGAGGAAGGAGTACCCGCCCGACCTGACGCTGCCGGACCTCAAGAGCGGGCTGTTCAGCACCGACGAGTTCCGCATGTACAGCTTCAAGGTGAAGCCCTGCTCCCGCGCCTACTCGCACGACTGGACCGAGTGCCCCTTCGTGCACCCGGGCGAGAACGCGCGGCGCCGCGACCCGCGCCGCTACTCCTACAGCTGCGTGCCCTGCCCCGAGTTCCGTAAGGGCGGCGCCTGCCGCAAGGGCGACGGCTGCGAGTACGCGCACGGCGTCTTCGAGTGCTGGCTCCACCCGGCGCAGTACCGGACGCGCCTCTGCAAGGACGAGGTGGGCTGCGCGCGCCGCATCTGCTTCTTCGCGCACAAGCGCGAGGAGCTCCGCGCCGTCAACCCCTCCGCGGTGTCCGTCGGCATGCAGATGCAGCCCACCGTGTCGCCGCCGCCGCCCAGCGGCCTCGGCGACATGCTCAGCCCGGCGGCCTGGCCCTCCTCCCCGGCGAGCAGGCTCAACAAGGCCGCGCTCGGCGGCGGCCGGGACCTGGACCTGGACCAGTACCAGCACATGCTGTTCGACACGGTGTCGTCGCCGAGGGCCAACTGGGGCTCGGCCGGCGGGATCGGCTCGCCGCTTCCCCCCGCCAGGGCCGTGCCGGACTACGCCGACCTGCTCGGCTCCGTCGACGCGGCCAGCATGTTGTCCCAGCTGCACGCGCTGTCGCTGAAGCAGGCCGGCGGCGACATGCCGGCATACGGCTCCATGGTGGCGGACACGCAGCCGCACATGGCGACGACGTCGCCCATGGTGGGCCTGGGCTCCAGCACCGCGTTCGGGCTCGACCACTCCATGGCCAAGGCCATCCTGAGCTCCCGCGCCTCCGCGTTCGCCAAGCGCAGCCAGAGCTTCGTCGACCGCGGCGGCCGCGCCCCGGCCGCGCGCTCGCTCATGTCGCAGCAGGCCGCCGCCGCCGGCGCGCCGCCCGTGCTCTCCGACTGGGCTTCGCCGGACGGCAGGCTGGACTGGGGAGTCCAGGGCGACGAGCTGCACAAGTTCCGCAAGTCCGCATCGTTCGCGTTCCGCGCGCGATCCCCACCGCCCCCCGCCGAGCCGGACGTCTCGTGGGTCAGCTCTCTTGTCAAGGACGGCCACGCCGGCGACATATTTGCGCAGTGGCCGGAGCTGGAGCAGATGGTGGCCTGATCCACCGGCCCTCACTGGCTCATAGCATCTAGCTGACCAAAGTTATTTCCTTGAATCATTTTTTCCCCTCCTTTCTTTGCTTAATTCCATTCGTACGAGATGTTTTTTTTACTAGTACATAGATAGGGCTGTTTCACAATAACATTTGGTCATCAACAAGAAGCATAGATACCCAAAGGGAGCTTTATAGTATACTGATGAGGAGGAACAGCCATCGGTTTATAAATAGTTGTACACACGAATTCCCTACATCACAAAGGAGTTTATATTTATTTTACTTGATGTATAAGATATCGGCAGACACGGTAAGATTTGATTCATGTGCTTTCCGCATGGCGACAATTGAGA

GRMZM2G117007_T01 from maize genome v3

Related TFome: pUT6115

Amino Acid Sequence
Copy to clipboard

MYNFKVKPCSRAYSHDWTECPFVHPGENARRRDPRRYSYSCVPCPEFRKGGACRKGDGCEYAHGVFECWLHPAQYRTRLC
KDEVGCARRICFFAHKREELRAVNPSAVSVGMQMQPTVSPPPPSGLGDMLSPAAWPSSPASRLNKAALGGGRDLDLDQYQ
HMLFDTVSSPRANWGSAGGIGSPLPPARAVPDYADLLGSVDAASMLSQLHALSLKQAGGDMPAYGSMVADTQPHMATTSP
MVGLGSSTAFGLDHSMAKAILSSRASAFAKRSQSFVDRGGRAPAARSLMSQQAAAAGAPPVLSDWASPDGRLDWGVQGDE
LHKFRKSASFAFRARSPPPPAEPDVSWVSSLVKDGHAGDIFAQWPELEQMVA

Nucleotide Sequence
Copy to clipboard

Expand

GACTGTTCAGCAACCGACGAGTTCC...

Zm00001d010956_T001 from maize genome v4

Amino Acid Sequence
Copy to clipboard

MCSGPRKPSTPPLPAETATAKNSSVMATALLLELAAADDVVAFRRAAEDDKAPALDAVGHWYGPSAAGAGAAAGRPRLEA
RTPTMVAALYGSTAVLAYVLSSAPAEAARASPTDGATPLHLAAAGGAPAAVAAAHILLAAGASADARAFSGLRAGDLLLP
RAAAAAAADADRALRVLLKSPAASPSSSPKKSASPPPAPEARKEYPPDLTLPDLKSGLFSTDEFRMYSFKVKPCSRAYSH
DWTECPFVHPGENARRRDPRRYSYSCVPCPEFRKGGACRKGDGCEYAHGVFECWLHPAQYRTRLCKDEVGCARRICFFAH
KREELRAVNPSAVSVGMQMQPTVSPPPPSGLGDMLSPAAWPSSPASRLNKAALGGGRDLDLDQYQHMLFDTVSSPRANWG
SAGGIGSPLPPARAVPDYADLLGSVDAASMLSQLHALSLKQAGGDMPAYGSMVADTQPHMATTSPMVGLGSSTAFGLDHS
MAKAILSSRASAFAKRSQSFVDRGGRAPAARSLMSQQAAAAGAPPVLSDWASPDGRLDWGVQGDELHKFRKSASFAFRAR
SPPPPAEPDVSWVSSLVKDGHAGDIFAQWPELEQMVA

Nucleotide Sequence
Copy to clipboard

Expand

ATGTGCTCAGGACCTCGCAAGCCGT...

Learn About Grassius

Species

Databases

Tools

Help

Protein ZmC3H7

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs

Interactions where ZmC3H7 is the regulator

Interactions where ZmC3H7 is the target
Expand

Zm00001eb354920_T001 from maize genome v5

Amino Acid Sequence
Copy to clipboard
Color Coding: None Secondary Structure Domain

Nucleotide Sequence
Copy to clipboard

Expand

GRMZM2G117007_T01 from maize genome v3

Amino Acid Sequence
Copy to clipboard

Nucleotide Sequence
Copy to clipboard

Expand

Zm00001d010956_T001 from maize genome v4

Amino Acid Sequence
Copy to clipboard

Nucleotide Sequence
Copy to clipboard

Expand

About Grassius

Access Data

Tools

Help